For the 2025-26 school year, there are 9 private high schools serving 8,400 students in Boone County, MO.
The top ranked private high schools in Boone County, MO include Columbia Independent School, Christian Fellowship School, and Mizzou K 12 Online/mu High School.
The average acceptance rate is 90%, which is higher than the Missouri private high school average acceptance rate of 85%.
Top Ranked Boone County Private High Schools (2025-26)
School
Location
Quick Facts
4600 Christian Fellowship Rd
Columbia, MO 65203
(573) 445-8565
Columbia, MO 65203
(573) 445-8565
Gr: PK-12 | 478 students Avg. class size: 20 students Sports: 8 | Extracurrculars: 10 Tuition & acceptance rate listed
1801 N Stadium Blvd
Columbia, MO 65202
(573) 777-9250
Columbia, MO 65202
(573) 777-9250
Gr: PK-12 | 400 students Avg. class size: 16 students Sports: 9 | Extracurrculars: 25 Tuition listed
136 Clark Hall
Columbia, MO 65211
(573) 884-9173
Columbia, MO 65211
(573) 884-9173
Gr: 6-12 | 6,961 students
Fr Tolton Catholic High School
(Catholic)
3351 E Gans Rd
Columbia, MO 65201
(573) 445-7700
Columbia, MO 65201
(573) 445-7700
Gr: 9-12 | 252 students Tuition listed
Heritage Academy![Heritage Academy Photo - 2016-2017 Heritage Academy Photo - 2016-2017]()

Alternative School
2900 Barberry Ave
Columbia, MO 65202
(573) 449-2252
Columbia, MO 65202
(573) 449-2252
Gr: K-12 | 89 students Avg. class size: 10 students Sports: 4 Tuition listed
High Road School Of Boone County
Special Education School
409 Vandiver Dr Bldg 7
Columbia, MO 65202
(573) 442-2418
Columbia, MO 65202
(573) 442-2418
Gr: K-12 | 39 students
Shalom Christian Academy
(Christian)
312 Ridgeway Ave
Columbia, MO 65203
(573) 256-4824
Columbia, MO 65203
(573) 256-4824
Gr: PK-12 | 20 students
6818 Audrain Road 9139
Centralia, MO 65240
(573) 682-2164
Centralia, MO 65240
(573) 682-2164
Gr: 9-12 | 161 students Avg. class size: 35 students Sports: 3 | Extracurrculars: 9 Tuition listed
Frequently Asked Questions
What are the top ranked private high schools in Boone County, MO?
The top ranked private high schools in Boone County, MO include Columbia Independent School, Christian Fellowship School, and Mizzou K 12 Online/mu High School.
How many private high schools are located in Boone County?
9 private high schools are located in Boone County.
How diverse are private high schools in Boone County?
Boone County private high schools are approximately 19% minority students, which is lower than the Missouri private school average of 22%.
What percentage of private high schools are religiously affiliated in Boone County?
Which private high schools in Boone County are often viewed compared to one another?
Popular comparisons of private high schools in Boone County include: Mizzou Academy vs. Fr Tolton Catholic High School, Mizzou K 12 Online/mu High School vs. Shalom Christian Academy
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