For the 2025 school year, there are 10 private schools serving 4,381 students in San Juan Capistrano, CA (there are 15 public schools, serving 11,494 public students). 28% of all K-12 students in San Juan Capistrano, CA are educated in private schools (compared to the CA state average of 10%).
The top ranked private schools in San Juan Capistrano, CA include St. Margaret's Episcopal School, Capistrano Valley Christian Schools, and Mission Basilica School.
The average acceptance rate is 78%, which is lower than the California private school average acceptance rate of 80%.
Top Ranked San Juan Capistrano Private Schools (2025)
School
Location
Quick Facts
32032 Del Obispo St
San Juan Capistrano, CA 92675
(949) 493-5683
San Juan Capistrano, CA 92675
(949) 493-5683
Gr: PK-12 | 710 students Avg. class size: 17 students Sports: 12 | Extracurrculars: 6 Tuition & acceptance rate listed
Mission Basilica School![Mission Basilica School Photo - MBS has two technology labs Mission Basilica School Photo - MBS has two technology labs]()

(Catholic)
31641 El Camino Real
San Juan Capistrano, CA 92675
(949) 234-1385
San Juan Capistrano, CA 92675
(949) 234-1385
Gr: NS-8 | 265 students Avg. class size: 25 students Sports: 8 | Extracurrculars: 6 Tuition listed
26333 Oso Rd
San Juan Capistrano, CA 92675
(949) 443-4050
San Juan Capistrano, CA 92675
(949) 443-4050
Gr: PK-12 | 418 students Avg. class size: 22 students Sports: 14 Tuition listed
26351 Junipero Serra Rd.
San Juan Capistrano, CA 92675
(949) 493-9307
San Juan Capistrano, CA 92675
(949) 493-9307
Gr: 9-12 | 1,291 student Avg. class size: 25 students Sports: 13 | Extracurrculars: 29 Tuition listed
St. Margaret's Episcopal School![St. Margaret's Episcopal School Photo - Our mission at St. Margaret's Episcopal School is to educate the hearts and minds of young people for lives of learning, leadership and service. St. Margaret's Episcopal School Photo - Our mission at St. Margaret's Episcopal School is to educate the hearts and minds of young people for lives of learning, leadership and service.]()

(Episcopal)
31641 La Novia
San Juan Capistrano, CA 92675
(949) 661-0108
San Juan Capistrano, CA 92675
(949) 661-0108
Gr: PK-12 | 1,238 student Avg. class size: 15 students Sports: 17 | Extracurrculars: 11
Community Presbyterian Preschool & Kindergarten
Daycare / Preschool (Presbyterian)
32202 Del Obispo St
San Juan Capistrano, CA 92675
(949) 493-9141
San Juan Capistrano, CA 92675
(949) 493-9141
Gr: PK-K | 113 students
26333 Oso Road
San Juan Capistrano, CA 92675
(714) 234-2784
San Juan Capistrano, CA 92675
(714) 234-2784
Gr: PK-8 | 250 students Sports: 8 Tuition & acceptance rate listed
The Johnson Academy
Special Education School
27127 Calle Arroyo Ste 1920
San Juan Capistrano, CA 92675
(949) 218-3814
San Juan Capistrano, CA 92675
(949) 218-3814
Gr: K-8 | 58 students
Marbella Montessori
Daycare / Preschool
31113 Rancho Viejo Rd
San Juan Capistrano, CA 92675
(949) 661-3355
San Juan Capistrano, CA 92675
(949) 661-3355
Gr: K | 15 students
San Juan Montessori
Montessori School
32143 Alipaz St
San Juan Capistrano, CA 92675
(949) 496-2927
San Juan Capistrano, CA 92675
(949) 496-2927
Gr: PK-K | 23 students Avg. class size: 12 students Tuition listed
San Juan Capistrano, California Private Schools (Closed)
School
Location
Quick Facts
Heights Christian Schools - San Juan Capistrano Preschool (Closed 2022)
Daycare / Preschool (Christian)
31501 Avenida Los Cerritos
San Juan Capistrano, CA 92675
(949) 429-5660
San Juan Capistrano, CA 92675
(949) 429-5660
Gr: NS-PK | 54 students Tuition listed
Frequently Asked Questions
What are the top ranked private schools in San Juan Capistrano, CA?
The top ranked private schools in San Juan Capistrano, CA include St. Margaret's Episcopal School, Capistrano Valley Christian Schools, and Mission Basilica School.
How many private schools are located in San Juanpistrano?
10 private schools are located in San Juanpistrano.
How diverse are private schools in San Juanpistrano?
San Juanpistrano private schools are approximately 34% minority students, which is lower than the California private school average of 51%.
What percentage of students in San Juanpistrano go to private school?
28% of all K-12 students in San Juanpistrano are educated in private schools (compared to the CA state average of 10%).
What percentage of private schools are religiously affiliated in San Juanpistrano?
Which private schools in San Juanpistrano are often viewed compared to one another?
Popular comparisons of private schools in San Juanpistrano include: Marbella Montessori vs. San Juan Montessori, San Juan Montessori vs. Marbella Montessori
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