For the 2025 school year, there are 6 private elementary schools serving 2,942 students in San Juan Capistrano, CA.
The top ranked private elementary schools in San Juan Capistrano, CA include St. Margaret's Episcopal School, Capistrano Valley Christian Schools, and Mission Basilica School.
The average acceptance rate is 78%, which is lower than the California private elementary school average acceptance rate of 81%.
Top Ranked San Juan Capistrano Private Elementary Schools (2025)
School
Location
Grades
Students
32032 Del Obispo St
San Juan Capistrano, CA 92675
(949) 493-5683
San Juan Capistrano, CA 92675
(949) 493-5683
Grades: PK-12
| 710 students
Mission Basilica School![Mission Basilica School Photo - MBS has two technology labs Mission Basilica School Photo - MBS has two technology labs]()

(Catholic)
31641 El Camino Real
San Juan Capistrano, CA 92675
(949) 234-1385
San Juan Capistrano, CA 92675
(949) 234-1385
Grades: NS-8
| 268 students
26333 Oso Rd
San Juan Capistrano, CA 92675
(949) 443-4050
San Juan Capistrano, CA 92675
(949) 443-4050
Grades: PK-12
| 418 students
St. Margaret's Episcopal School![St. Margaret's Episcopal School Photo - Our mission at St. Margaret's Episcopal School is to educate the hearts and minds of young people for lives of learning, leadership and service. St. Margaret's Episcopal School Photo - Our mission at St. Margaret's Episcopal School is to educate the hearts and minds of young people for lives of learning, leadership and service.]()

(Episcopal)
31641 La Novia
San Juan Capistrano, CA 92675
(949) 661-0108
San Juan Capistrano, CA 92675
(949) 661-0108
Grades: PK-12
| 1,238 students
26333 Oso Road
San Juan Capistrano, CA 92675
(714) 234-2784
San Juan Capistrano, CA 92675
(714) 234-2784
Grades: PK-8
| 250 students
The Johnson Academy
Special Education School
27127 Calle Arroyo Ste 1920
San Juan Capistrano, CA 92675
(949) 218-3814
San Juan Capistrano, CA 92675
(949) 218-3814
Grades: K-8
| 58 students
San Juan Capistrano, California Private Schools (Closed)
School
Location
Grades
Students
Heights Christian Schools - San Juan Capistrano Preschool (Closed 2022)
Daycare / Preschool (Christian)
31501 Avenida Los Cerritos
San Juan Capistrano, CA 92675
(949) 429-5660
San Juan Capistrano, CA 92675
(949) 429-5660
Grades: NS-PK
| 54 students
Frequently Asked Questions
What are the top ranked private elementary schools in San Juan Capistrano, CA?
The top ranked private elementary schools in San Juan Capistrano, CA include St. Margaret's Episcopal School, Capistrano Valley Christian Schools, and Mission Basilica School.
How many private elementary schools are located in San Juanpistrano?
6 private elementary schools are located in San Juanpistrano.
How diverse are private elementary schools in San Juanpistrano?
San Juanpistrano private elementary schools are approximately 36% minority students, which is lower than the California private school average of 49%.
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